GNU Octave  8.1.0
A high-level interpreted language, primarily intended for numerical computations, mostly compatible with Matlab
ls-hdf5.h
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25 
26 #if ! defined (octave_ls_hdf5_h)
27 #define octave_ls_hdf5_h 1
28 
29 #include "octave-config.h"
30 
31 #include <iosfwd>
32 
33 #include "oct-hdf5-types.h"
34 #include "ov.h"
35 
36 // first, we need to define our own dummy stream subclass, since
37 // HDF5 needs to do its own file i/o
38 
39 // hdf5_fstreambase is used for both input and output streams, modeled
40 // on the fstreambase class in <fstream.h>
41 
42 class hdf5_fstreambase : virtual public std::ios
43 {
44 public:
45 
46  // HDF5 uses an "id" to refer to an open file
48 
49  // keep track of current item index in the file
51 
53 
55 
56  OCTINTERP_API hdf5_fstreambase (const char *name, int mode,
57  int /* prot */ = 0);
58 
59  OCTINTERP_API void close (void);
60 
61  OCTINTERP_API void open (const char *name, int mode, int);
62 
63  OCTINTERP_API void open_create (const char *name, int mode);
64 };
65 
66 // input and output streams, subclassing istream and ostream
67 // so that we can pass them for stream parameters in the functions below.
68 
69 class hdf5_ifstream : public hdf5_fstreambase, public std::istream
70 {
71 public:
72 
73  hdf5_ifstream () : hdf5_fstreambase (), std::istream (nullptr) { }
74 
75  hdf5_ifstream (const char *name, int mode = std::ios::in | std::ios::binary,
76  int prot = 0)
77  : hdf5_fstreambase (name, mode, prot), std::istream (nullptr) { }
78 
79  void open (const char *name, int mode = std::ios::in | std::ios::binary,
80  int prot = 0)
81  { hdf5_fstreambase::open (name, mode, prot); }
82 };
83 
84 class hdf5_ofstream : public hdf5_fstreambase, public std::ostream
85 {
86 public:
87 
88  hdf5_ofstream () : hdf5_fstreambase (), std::ostream (nullptr) { }
89 
90  hdf5_ofstream (const char *name, int mode = std::ios::out | std::ios::binary,
91  int prot = 0)
92  : hdf5_fstreambase (name, mode, prot), std::ostream (nullptr) { }
93 
94  void open (const char *name, int mode = std::ios::out | std::ios::binary,
95  int prot = 0)
96  { hdf5_fstreambase::open (name, mode, prot); }
97 };
98 
99 // Callback data structure for passing data to hdf5_read_next_data, below.
100 
102 {
103 public:
105  : name (), global (false), tc (), doc () { }
106 
107  // the following fields are set by hdf5_read_data on successful return:
108 
109  // the name of the variable
110  std::string name;
111 
112  // whether it is global
113  bool global;
114 
115  // the value of the variable, in Octave form
117 
118  // a documentation string (NULL if none)
119  std::string doc;
120 };
121 
122 extern OCTINTERP_API octave_hdf5_id
124 
125 extern OCTINTERP_API octave_hdf5_id
127 
128 extern OCTINTERP_API bool
130 
131 extern OCTINTERP_API octave_hdf5_err
132 hdf5_read_next_data (octave_hdf5_id group_id, const char *name, void *dv);
133 
134 extern OCTINTERP_API octave_hdf5_err
135 hdf5_h5g_iterate (octave_hdf5_id loc_id, const char *name, int *idx,
136  void *operator_data);
137 
138 extern OCTINTERP_API bool
139 add_hdf5_data (octave_hdf5_id loc_id, const octave_value& tc,
140  const std::string& name, const std::string& doc,
141  bool mark_global, bool save_as_floats);
142 
143 extern OCTINTERP_API int
144 save_hdf5_empty (octave_hdf5_id loc_id, const char *name, const dim_vector& d);
145 
146 extern OCTINTERP_API int
147 load_hdf5_empty (octave_hdf5_id loc_id, const char *name, dim_vector& d);
148 
149 extern OCTINTERP_API std::string
150 read_hdf5_data (std::istream& is, const std::string& filename, bool& global,
151  octave_value& tc, std::string& doc,
152  const string_vector& argv, int argv_idx, int argc);
153 
154 extern OCTINTERP_API bool
155 save_hdf5_data (std::ostream& os, const octave_value& tc,
156  const std::string& name, const std::string& doc,
157  bool mark_global, bool save_as_floats);
158 
159 extern OCTINTERP_API bool
160 hdf5_check_attr (octave_hdf5_id loc_id, const char *attr_name);
161 
162 extern OCTINTERP_API bool
164  const char *attr_name, void *buf);
165 
166 extern OCTINTERP_API octave_hdf5_err
167 hdf5_add_attr (octave_hdf5_id loc_id, const char *attr_name);
168 
169 
170 extern OCTINTERP_API octave_hdf5_err
172  const char *attr_name, void *buf);
173 
174 #endif
Vector representing the dimensions (size) of an Array.
Definition: dim-vector.h:94
OCTINTERP_API void open(const char *name, int mode, int)
Definition: ls-hdf5.cc:123
OCTINTERP_API void open_create(const char *name, int mode)
Definition: ls-hdf5.cc:142
octave_hdf5_id file_id
Definition: ls-hdf5.h:47
OCTINTERP_API void close(void)
Definition: ls-hdf5.cc:103
int current_item
Definition: ls-hdf5.h:50
hdf5_ifstream()
Definition: ls-hdf5.h:73
void open(const char *name, int mode=std::ios::in|std::ios::binary, int prot=0)
Definition: ls-hdf5.h:79
hdf5_ifstream(const char *name, int mode=std::ios::in|std::ios::binary, int prot=0)
Definition: ls-hdf5.h:75
hdf5_ofstream()
Definition: ls-hdf5.h:88
void open(const char *name, int mode=std::ios::out|std::ios::binary, int prot=0)
Definition: ls-hdf5.h:94
hdf5_ofstream(const char *name, int mode=std::ios::out|std::ios::binary, int prot=0)
Definition: ls-hdf5.h:90
save_type
Definition: data-conv.h:87
F77_RET_T const F77_DBLE const F77_DBLE F77_DBLE * d
OCTINTERP_API bool save_hdf5_data(std::ostream &os, const octave_value &tc, const std::string &name, const std::string &doc, bool mark_global, bool save_as_floats)
Definition: ls-hdf5.cc:1501
OCTINTERP_API int load_hdf5_empty(octave_hdf5_id loc_id, const char *name, dim_vector &d)
Definition: ls-hdf5.cc:1306
OCTINTERP_API octave_hdf5_err hdf5_add_scalar_attr(octave_hdf5_id loc_id, octave_hdf5_id type_id, const char *attr_name, void *buf)
Definition: ls-hdf5.cc:1205
OCTINTERP_API octave_hdf5_id save_type_to_hdf5(save_type st)
Definition: ls-hdf5.cc:1350
OCTINTERP_API bool add_hdf5_data(octave_hdf5_id loc_id, const octave_value &tc, const std::string &name, const std::string &doc, bool mark_global, bool save_as_floats)
Definition: ls-hdf5.cc:1406
OCTINTERP_API std::string read_hdf5_data(std::istream &is, const std::string &filename, bool &global, octave_value &tc, std::string &doc, const string_vector &argv, int argv_idx, int argc)
Definition: ls-hdf5.cc:1079
OCTINTERP_API bool hdf5_types_compatible(octave_hdf5_id t1, octave_hdf5_id t2)
Definition: ls-hdf5.cc:269
OCTINTERP_API octave_hdf5_err hdf5_add_attr(octave_hdf5_id loc_id, const char *attr_name)
Definition: ls-hdf5.cc:1164
OCTINTERP_API bool hdf5_check_attr(octave_hdf5_id loc_id, const char *attr_name)
Definition: ls-hdf5.cc:300
OCTINTERP_API octave_hdf5_err hdf5_h5g_iterate(octave_hdf5_id loc_id, const char *name, int *idx, void *operator_data)
Definition: ls-hdf5.cc:1059
OCTINTERP_API int save_hdf5_empty(octave_hdf5_id loc_id, const char *name, const dim_vector &d)
Definition: ls-hdf5.cc:1249
OCTINTERP_API octave_hdf5_id hdf5_make_complex_type(octave_hdf5_id num_type)
Definition: ls-hdf5.cc:405
OCTINTERP_API octave_hdf5_err hdf5_read_next_data(octave_hdf5_id group_id, const char *name, void *dv)
Definition: ls-hdf5.cc:1045
OCTINTERP_API bool hdf5_get_scalar_attr(octave_hdf5_id loc_id, octave_hdf5_id type_id, const char *attr_name, void *buf)
Definition: ls-hdf5.cc:347
int octave_hdf5_err
int64_t octave_hdf5_id
octave_value tc
Definition: ls-hdf5.h:116
std::string name
Definition: ls-hdf5.h:110
hdf5_callback_data(void)
Definition: ls-hdf5.h:104
std::string doc
Definition: ls-hdf5.h:119